STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B8C4J7_THAPSUncharacterized protein. (103 aa)    
Predicted Functional Partners:
B8BY97_THAPS
Uncharacterized protein.
   
 
  0.803
B8CBW6_THAPS
Cleavage and polyadenylation specificity factor subunit 2.
   
 
  0.801
B8BZD4_THAPS
CPSF_A domain-containing protein.
     
  0.800
B8CEM0_THAPS
WD_REPEATS_REGION domain-containing protein.
   
 
  0.661
B8BX38_THAPS
Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family.
   
 
  0.653
B8BUN0_THAPS
Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family.
     
  0.650
B8BY50_THAPS
Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family.
     
  0.650
B8C4D4_THAPS
Uncharacterized protein.
   
 
  0.650
B8C994_THAPS
WD_REPEATS_REGION domain-containing protein.
   
 
  0.650
Your Current Organism:
Thalassiosira pseudonana
NCBI taxonomy Id: 35128
Other names: T. pseudonana
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.