STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B8C524_THAPSUBX domain-containing protein. (372 aa)    
Predicted Functional Partners:
B8CCV1_THAPS
Protein kinase domain-containing protein.
   
  0.879
B8BUA2_THAPS
NPL4 domain-containing protein.
    
 
 0.873
B8C4J5_THAPS
UBA domain-containing protein.
    
 
 0.869
B8C507_THAPS
PRKCSH_1 domain-containing protein.
    
 
 0.837
B8BZP4_THAPS
Uncharacterized protein.
   
 
 0.832
B8C686_THAPS
U-box domain-containing protein.
   
 
 0.776
B8C7G1_THAPS
Uncharacterized protein.
   
 
 0.767
B8CEK1_THAPS
UBX domain-containing protein.
    
 
 0.765
B8CDI6_THAPS
Uncharacterized protein.
    
 
 0.722
B8BWC2_THAPS
Uncharacterized protein.
   
 
 0.704
Your Current Organism:
Thalassiosira pseudonana
NCBI taxonomy Id: 35128
Other names: T. pseudonana
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