STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B8C5X1_THAPSMethyl transferase-like protein. (252 aa)    
Predicted Functional Partners:
B8BZI1_THAPS
Obtusifoliol 14-alpha demethylase; Belongs to the cytochrome P450 family.
   
 0.513
B8BXY6_THAPS
Uncharacterized protein.
   
 0.484
B8C314_THAPS
Uncharacterized protein.
   
 0.483
B8BWW2_THAPS
PEROXIDASE_4 domain-containing protein; Belongs to the peroxidase family.
   
 
 0.475
H4_2
Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.
    
 0.474
B8BSS5_THAPS
Uncharacterized protein.
   
 0.466
RS24
RS24, ribosomal protein 24 40S small ribosomal subunit.
   
  0.461
B8C5R0_THAPS
KH domain-containing protein.
   
  0.460
RS27
RS27, ribosomal protein 27 40S small ribosomal subunit.
    
  0.454
RS4
40S ribosomal protein S4; Belongs to the eukaryotic ribosomal protein eS4 family.
   
  0.453
Your Current Organism:
Thalassiosira pseudonana
NCBI taxonomy Id: 35128
Other names: T. pseudonana
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.