STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B8C8Q3_THAPSUncharacterized protein; Belongs to the adenylate kinase family. (153 aa)    
Predicted Functional Partners:
RS15B
RS15B, ribosomal protein 15B 40S small ribosomal subunit; Belongs to the universal ribosomal protein uS19 family.
  
  
 0.633
B8C0D4_THAPS
KH type-2 domain-containing protein.
  
  
 0.631
APT2
Probable adenine phosphoribosyltransferase.
  
 
 0.625
RL5
RL5, ribosomal protein 5, 60S large ribosomal subunit.
  
  
 0.624
rpl14
50S ribosomal protein L14, chloroplastic; Binds to 23S rRNA.
  
 
 0.567
rpl23-2
Protein 23 of the large ribosomal subunit; Belongs to the universal ribosomal protein uL14 family.
  
 
 0.567
RL35
RL35, ribosomal protein 35 60S large ribosomal subunit.
  
  
 0.566
SEC61-1
Protein translocase complex subunit; Belongs to the SecY/SEC61-alpha family.
  
  
 0.564
SEC61-2
Protein transportor; Belongs to the SecY/SEC61-alpha family.
  
  
 0.564
rpl2
50S ribosomal protein L2, chloroplastic; Belongs to the universal ribosomal protein uL2 family.
  
  
 0.563
Your Current Organism:
Thalassiosira pseudonana
NCBI taxonomy Id: 35128
Other names: T. pseudonana
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