B8C9Z3_THAPS protein (Thalassiosira pseudonana)

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

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Textmining

[Homology]

Score

B8C9Z3_THAPS

Uncharacterized protein. (95 aa)

Predicted Functional Partners:

RL5

0.999

THAPS_269961

0.999

RL18

0.999

RL21

0.999

RL15

0.999

RL38

0.999

RL12

0.999

RL14

0.999

B8BUM0_THAPS

0.999

RL39

0.999

Your Current Organism:

Thalassiosira pseudonana

NCBI taxonomy Id: 35128
Other names: T. pseudonana

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... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
B8BUM0_THAPS	B8C9Z3_THAPS	B8BUM0	B8C9Z3	Uncharacterized protein.	Uncharacterized protein.	0.999
B8BUM0_THAPS	RL12	B8BUM0	B8BTS3	Uncharacterized protein.	RL12, ribosomal protein 11 60S large ribosomal subunit; Belongs to the universal ribosomal protein uL11 family.	0.999
B8BUM0_THAPS	RL14	B8BUM0	B8BUA7	Uncharacterized protein.	RL14, ribosomal protein 14 60S large ribosomal subunit.	0.999
B8BUM0_THAPS	RL15	B8BUM0	B8BS57	Uncharacterized protein.	Ribosomal protein L15; Belongs to the eukaryotic ribosomal protein eL15 family.	0.999
B8BUM0_THAPS	RL18	B8BUM0	B5YMU6	Uncharacterized protein.	RL18, ribosomal protein 18, 60S large ribosomal subunit.	0.999
B8BUM0_THAPS	RL21	B8BUM0	B5YNM6	Uncharacterized protein.	RL21, ribosomal protein 21, 60S large ribosomal subunit.	0.999
B8BUM0_THAPS	RL38	B8BUM0	B8BTA6	Uncharacterized protein.	RL38, ribosomal protein 38 60S large ribosomal subunit; Belongs to the eukaryotic ribosomal protein eL38 family.	0.999
B8BUM0_THAPS	RL39	B8BUM0	B8BVE4	Uncharacterized protein.	RL39, ribosomal protein 39 60S large ribosomal subunit.	0.999
B8BUM0_THAPS	RL5	B8BUM0	B5YLN7	Uncharacterized protein.	RL5, ribosomal protein 5, 60S large ribosomal subunit.	0.999
B8BUM0_THAPS	THAPS_269961	B8BUM0	B5YM44	Uncharacterized protein.	Predicted protein.	0.999
B8C9Z3_THAPS	B8BUM0_THAPS	B8C9Z3	B8BUM0	Uncharacterized protein.	Uncharacterized protein.	0.999
B8C9Z3_THAPS	RL12	B8C9Z3	B8BTS3	Uncharacterized protein.	RL12, ribosomal protein 11 60S large ribosomal subunit; Belongs to the universal ribosomal protein uL11 family.	0.999
B8C9Z3_THAPS	RL14	B8C9Z3	B8BUA7	Uncharacterized protein.	RL14, ribosomal protein 14 60S large ribosomal subunit.	0.999
B8C9Z3_THAPS	RL15	B8C9Z3	B8BS57	Uncharacterized protein.	Ribosomal protein L15; Belongs to the eukaryotic ribosomal protein eL15 family.	0.999
B8C9Z3_THAPS	RL18	B8C9Z3	B5YMU6	Uncharacterized protein.	RL18, ribosomal protein 18, 60S large ribosomal subunit.	0.999
B8C9Z3_THAPS	RL21	B8C9Z3	B5YNM6	Uncharacterized protein.	RL21, ribosomal protein 21, 60S large ribosomal subunit.	0.999
B8C9Z3_THAPS	RL38	B8C9Z3	B8BTA6	Uncharacterized protein.	RL38, ribosomal protein 38 60S large ribosomal subunit; Belongs to the eukaryotic ribosomal protein eL38 family.	0.999
B8C9Z3_THAPS	RL39	B8C9Z3	B8BVE4	Uncharacterized protein.	RL39, ribosomal protein 39 60S large ribosomal subunit.	0.999
B8C9Z3_THAPS	RL5	B8C9Z3	B5YLN7	Uncharacterized protein.	RL5, ribosomal protein 5, 60S large ribosomal subunit.	0.999
B8C9Z3_THAPS	THAPS_269961	B8C9Z3	B5YM44	Uncharacterized protein.	Predicted protein.	0.999