STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B8CBX4_THAPSFPG_CAT domain-containing protein. (271 aa)    
Predicted Functional Partners:
B8C064_THAPS
Uncharacterized protein.
  
  
 0.775
THAPS_35464
MutY family most like Nth1.
   
  
 0.629
B8LD98_THAPS
Predicted protein.
   
  
 0.629
B8C4R5_THAPS
DNA polymerase.
  
  
 0.602
P5CS
Delta-1-pyrroline-5-carboxylate synthase; In the C-terminal section; belongs to the gamma-glutamyl phosphate reductase family.
  
  
 0.602
B8C0P9_THAPS
53EXOc domain-containing protein.
  
  
 0.601
B8CEI1_THAPS
POLAc domain-containing protein.
  
  
 0.601
B8BVY7_THAPS
XPGI domain-containing protein.
  
  
 0.547
B8C7S2_THAPS
DNA repair enzyme.
  
  
 0.547
B8LCM7_THAPS
Exonuclease 1.
  
  
 0.544
Your Current Organism:
Thalassiosira pseudonana
NCBI taxonomy Id: 35128
Other names: T. pseudonana
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.