STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B8CEA4_THAPSUncharacterized protein. (454 aa)    
Predicted Functional Partners:
THAPSDRAFT_750
Vacuolar protein sorting Vps45; Belongs to the STXBP/unc-18/SEC1 family.
 
 
    0.901
B8BRP6_THAPS
GTPase Der; GTPase that plays an essential role in the late steps of ribosome biogenesis.
  
 
 0.636
B8BTK0_THAPS
GTPase Der; GTPase that plays an essential role in the late steps of ribosome biogenesis.
  
 
 0.635
B8CF78_THAPS
Predicted protein; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. TrmE GTPase family.
  
 
 0.635
Your Current Organism:
Thalassiosira pseudonana
NCBI taxonomy Id: 35128
Other names: T. pseudonana
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