STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B8CEN5_THAPSUncharacterized protein; Belongs to the SKP1 family. (156 aa)    
Predicted Functional Partners:
ZFP3
Zinc finger like protein.
   
 0.999
B8C3J2_THAPS
RING-type domain-containing protein.
   
 0.912
B8CD48_THAPS
Uncharacterized protein; Belongs to the SKP1 family.
  
  
 
0.902
B8CC21_THAPS
PI3K/PI4K domain-containing protein.
    
 0.893
cdk1
Cyclin-dependent kinases regulatory subunit; Binds to the catalytic subunit of the cyclin dependent kinases and is essential for their biological function.
    
 0.828
rpl2
50S ribosomal protein L2, chloroplastic; Belongs to the universal ribosomal protein uL2 family.
   
 0.793
B8CE66_THAPS
MPN domain-containing protein.
   
 0.772
B8C6P7_THAPS
Uncharacterized protein.
   
 
 0.771
B8BQ40_THAPS
Cullin; Belongs to the cullin family.
   
 0.750
B8C8Z1_THAPS
Uncharacterized protein.
   
 0.750
Your Current Organism:
Thalassiosira pseudonana
NCBI taxonomy Id: 35128
Other names: T. pseudonana
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