STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B8CEZ7_THAPSDFP domain-containing protein. (281 aa)    
Predicted Functional Partners:
HAL3
HAL3 halotolerance protein.
    
 0.954
THAPS_15292
Predicted protein.
     
 0.943
THAPSDRAFT_460
Aminotransferase.
  
  0.828
B8BUL0_THAPS
Cysteine synthase; Belongs to the cysteine synthase/cystathionine beta- synthase family.
    
  0.815
B8LD59_THAPS
PALP domain-containing protein.
    
  0.815
AAT1_2
Aspartate aminotransferase.
    
  0.802
AAT2
Aspartate aminotransferase.
    
  0.802
trpAB
Tryptophane synthase.
  
 
 0.693
B8C2V4_THAPS
Probable dUTP pyrophosphatase.
  
  
 0.663
B8C6T1_THAPS
Cytochrome c domain-containing protein; Electron carrier protein. The oxidized form of the cytochrome c heme group can accept an electron from the heme group of the cytochrome c1 subunit of cytochrome reductase. Cytochrome c then transfers this electron to the cytochrome oxidase complex, the final protein carrier in the mitochondrial electron-transport chain.
     
 0.633
Your Current Organism:
Thalassiosira pseudonana
NCBI taxonomy Id: 35128
Other names: T. pseudonana
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