STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B8CF18_THAPSANK_REP_REGION domain-containing protein. (1443 aa)    
Predicted Functional Partners:
ACP3
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
  
 
 0.825
B8C103_THAPS
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
  
 
 0.818
trpAB
Tryptophane synthase.
  
  
 0.803
THAPS_269935
HisD, histidinol dehydrogenase; Belongs to the histidinol dehydrogenase family.
   
  
 0.659
B8BUA9_THAPS
Probable phosphoribosyl-amp cyclohydrolase.
   
  
 0.648
B8C9P1_THAPS
Indole-3-glycerol-phosphate synthase.
  
  
 0.612
B8C9P2_THAPS
IGPS domain-containing protein.
  
  
 0.601
B8C3Y5_THAPS
Component II, glutamine amidotransferase.
     
 0.597
B8BUH0_THAPS
Uncharacterized protein.
  
 
 0.538
B8C078_THAPS
4-coumarate-coa ligase.
  
 
 0.538
Your Current Organism:
Thalassiosira pseudonana
NCBI taxonomy Id: 35128
Other names: T. pseudonana
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