STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B8LBG1_THAPSUncharacterized protein. (200 aa)    
Predicted Functional Partners:
B8CC21_THAPS
PI3K/PI4K domain-containing protein.
   
 0.834
B8C758_THAPS
ANK_REP_REGION domain-containing protein.
    
 0.725
B8C6R4_THAPS
Uncharacterized protein.
   
 0.722
B8BXT6_THAPS
Uncharacterized protein.
   
 0.634
B8BYX1_THAPS
UBIQUITIN_CONJUGAT_2 domain-containing protein.
   
  0.582
B8BQ22_THAPS
Uncharacterized protein; Belongs to the actin family.
    
 0.580
ACT4
Actin-related protein centractin-like protein; Belongs to the actin family.
    
 0.580
ACT5
Actin related protein centractin-like protein; Belongs to the actin family.
    
 0.580
ACT1
Actin-like protein.
    
 0.580
B8C595_THAPS
Syntaxin-interacting protein unc-18; Belongs to the STXBP/unc-18/SEC1 family.
   
 
  0.559
Your Current Organism:
Thalassiosira pseudonana
NCBI taxonomy Id: 35128
Other names: T. pseudonana
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.