STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B8LD36_THAPSPredicted protein. (2210 aa)    
Predicted Functional Partners:
B8C441_THAPS
Uncharacterized protein.
   
 
 0.992
B8BUJ2_THAPS
Uncharacterized protein.
   
    0.689
THAPS_7265
Predicted protein.
   
  
 0.685
B8BXM4_THAPS
Brix domain-containing protein.
   
    0.665
B8BQ23_THAPS
WD repeat protein.
   
    0.637
B8LE81_THAPS
Ribosome biogenesis regulatory protein; Involved in ribosomal large subunit assembly. Belongs to the RRS1 family.
   
    0.634
B8BYB4_THAPS
Uncharacterized protein.
   
   0.629
B8BV99_THAPS
WD40-repeat protein.
   
   0.628
RL30
RL30, ribosomal protein 30 60S large ribosomal subunit.
   
    0.617
B8C7P5_THAPS
Uncharacterized protein.
   
   0.609
Your Current Organism:
Thalassiosira pseudonana
NCBI taxonomy Id: 35128
Other names: T. pseudonana
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.