STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B8LDC6_THAPSPredicted protein. (1810 aa)    
Predicted Functional Partners:
B8BS27_THAPS
Uncharacterized protein.
   
 0.986
B8C5N5_THAPS
Uncharacterized protein.
   
 0.972
THAPSDRAFT_337
Tr-type G domain-containing protein.
    
 0.938
THAPS_10905
Predicted protein.
   
 
 0.926
B8BXI9_THAPS
KH_dom_type_1 domain-containing protein.
    
 0.922
B8C5B2_THAPS
RNase_PH domain-containing protein.
   
 0.921
B8C5Z9_THAPS
Helicase.
   
 0.916
B8LBV1_THAPS
Predicted protein.
   
 0.887
B8C038_THAPS
Ran binding protein 7.
   
 0.869
B8BT46_THAPS
Uncharacterized protein.
   
 0.866
Your Current Organism:
Thalassiosira pseudonana
NCBI taxonomy Id: 35128
Other names: T. pseudonana
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