STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B8LDM8_THAPSPredicted protein. (325 aa)    
Predicted Functional Partners:
RPN2
26S proteasome regulatory subunit Rpn2 26S subunit, non-atpase; Belongs to the proteasome subunit S1 family.
    
 0.629
RPT5
26S proteasome ATPase regulatory subunit; Belongs to the AAA ATPase family.
   
 0.614
RPT3
26S proteasome ATPase regulatory subunit; Belongs to the AAA ATPase family.
   
 0.614
RPT4
26S proteasome ATPase regulatory subunit; Belongs to the AAA ATPase family.
   
 0.613
RPN5
26S proteasome regulatory subunit rpn5.
   
 0.560
RPN1
26S proteasome regulatory subunit RPN1 2.
    
 0.542
trpAB
Tryptophane synthase.
  
  
 0.536
B8C085_THAPS
PCI domain-containing protein.
    
 0.524
B8CCE3_THAPS
VWFA domain-containing protein.
   
 0.520
B8C216_THAPS
PCI domain-containing protein.
    
 0.501
Your Current Organism:
Thalassiosira pseudonana
NCBI taxonomy Id: 35128
Other names: T. pseudonana
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.