STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B8LE15_THAPSHelicase-like protein. (592 aa)    
Predicted Functional Partners:
B8BYC0_THAPS
DNA_MISMATCH_REPAIR_2 domain-containing protein.
   
 
 0.665
B8C982_THAPS
DNA_MISMATCH_REPAIR_2 domain-containing protein.
   
 
 0.660
B8CE54_THAPS
AAA_12 domain-containing protein.
   
 
 0.580
B8BVY7_THAPS
XPGI domain-containing protein.
   
 
 0.573
B8C060_THAPS
Uncharacterized protein.
   
 
 0.563
B8LCM7_THAPS
Exonuclease 1.
   
 
 0.549
B8CA12_THAPS
RING-type domain-containing protein.
   
 
 0.531
B8LEH2_THAPS
ATP-dependent DNA helicase; Belongs to the helicase family. RecQ subfamily.
   
 
 0.515
B8BY90_THAPS
Formate-tetrahydrofolate ligase.
   
   0.438
THAPS_15593
Predicted protein.
   
 
 0.429
Your Current Organism:
Thalassiosira pseudonana
NCBI taxonomy Id: 35128
Other names: T. pseudonana
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.