STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B8LEB2_THAPSABC transporter. (441 aa)    
Predicted Functional Partners:
B8LEB1_THAPS
Predicted protein.
 
    0.946
B8C0B8_THAPS
ABC transporter.
 
  
0.772
B8BWS7_THAPS
Uncharacterized protein.
   
 0.726
THAPS_263118
ABC transporter family protein.
  
 0.497
B8C1N1_THAPS
ABC transporter.
  
0.445
B8BWG8_THAPS
ABC transporter.
  
0.440
B8CA11_THAPS
ABC transporter multi-drug efflux transporter-like protein.
   
0.421
THAPS_6873
Predicted protein.
   
 0.414
B8C1X2_THAPS
DUF4392 domain-containing protein.
   
 0.414
Your Current Organism:
Thalassiosira pseudonana
NCBI taxonomy Id: 35128
Other names: T. pseudonana
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.