STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Thaps10811Predicted protein (590 aa)    
Predicted Functional Partners:
Thaps37472
Uncharacterized protein
   
 
 0.821
Thaps20763
Uncharacterized protein
   
 
 0.810
CDP1
Cell differentiation protein
    
 
 0.800
Thaps37963
Uncharacterized protein
   
 
 0.761
Thaps20268
Predicted protein
   
 
 0.760
Thaps17845
Uncharacterized protein
   
 
 0.678
Thaps21498
Atp-dependent RNA DEAD/DEAH box helicase; Belongs to the DEAD box helicase family
   
 
 0.634
Thaps268896
Uncharacterized protein
   
 
 0.587
pabA
Polyadenylate-binding protein; Binds the poly(A) tail of mRNA
   
 
 0.552
Thaps4253
Uncharacterized protein
   
 
 0.524
Your Current Organism:
Thalassiosira pseudonana
NCBI taxonomy Id: 35128
Other names: T. pseudonana, Thalassiosira pseudonana
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