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Thaps35968 protein (Thalassiosira pseudonana) - STRING interaction network
"Thaps35968" - Uncharacterized protein in Thalassiosira pseudonana
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Thaps35968Uncharacterized protein (610 aa)    
Predicted Functional Partners:
Thaps1622
DNA primase; Belongs to the eukaryotic-type primase small subunit family (504 aa)
     
   
  0.729
rpoT
DNA-directed RNA polymerase; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (595 aa)
     
   
  0.665
Thaps24666
Uncharacterized protein (344 aa)
     
 
  0.468
SCS1
Succinate--CoA ligase [ADP-forming] subunit beta, mitochondrial; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of ATP and thus represents the only step of substrate- level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit (419 aa)
     
   
  0.444
Thaps9772
Uncharacterized protein (536 aa)
     
   
  0.419
Thaps39255
Glycyl tRNA synthetase (683 aa)
     
   
  0.410
Thaps268398
Glycyl tRNA synthetase (462 aa)
     
   
  0.410
Thaps263033
DNA polymerase (500 aa)
 
 
   
  0.408
SCS2
Succinate--CoA ligase [ADP-forming] subunit alpha, mitochondrial; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of ATP and thus represents the only step of substrate- level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit (299 aa)
     
 
  0.406
Your Current Organism:
Thalassiosira pseudonana
NCBI taxonomy Id: 35128
Other names: T. pseudonana, Thalassiosira pseudonana
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