STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pepQXaa-Pro dipeptidase, Metallo peptidase, MEROPS family M24B; Splits dipeptides with a prolyl residue in the C-terminal position. (429 aa)    
Predicted Functional Partners:
Maqu_0454
Transcriptional regulator, LysR family; PFAM: regulatory protein, LysR; LysR, substrate-binding; KEGG: csa:Csal_1868 transcriptional regulator, LysR family.
       0.773
Maqu_0451
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: csa:Csal_1871 binding-protein-dependent transport systems inner membrane component.
  
  
 0.636
Maqu_0456
PFAM: BFD domain protein [2Fe-2S]-binding domain protein; KEGG: noc:Noc_1692 BFD-like (2Fe-2S)-binding region.
 
     0.635
Maqu_0450
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: csa:Csal_1872 binding-protein-dependent transport systems inner membrane component.
     
 0.623
Maqu_0452
KEGG: csa:Csal_1870 oligopeptide/dipeptide ABC transporter, ATP-binding protein-like protein; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter, C-terminal domain protein; SMART: AAA ATPase; Belongs to the ABC transporter superfamily.
  
  
 0.607
Maqu_0453
KEGG: csa:Csal_1869 oligopeptide/dipeptide ABC transporter, ATP-binding protein-like protein; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter, C-terminal domain protein; SMART: AAA ATPase; Belongs to the ABC transporter superfamily.
  
  
 0.607
metG
methionyl-tRNA synthetase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation.
   
 
 0.514
Maqu_0449
PFAM: extracellular solute-binding protein, family 5; KEGG: csa:Csal_1873 extracellular solute-binding protein, family 5.
     
 0.466
plsB
PFAM: phospholipid/glycerol acyltransferase; KEGG: hch:HCH_05086 glycerol-3-phosphate O-acyltransferase; Belongs to the GPAT/DAPAT family.
  
    0.456
Maqu_2187
PFAM: ABC transporter, transmembrane region; ABC transporter related; SMART: AAA ATPase; KEGG: noc:Noc_0115 ABC transporter, transmembrane region.
  
  0.450
Your Current Organism:
Marinobacter hydrocarbonoclasticus
NCBI taxonomy Id: 351348
Other names: M. hydrocarbonoclasticus VT8, Marinobacter aquaeolei VT8, Marinobacter aquaeolei str. VT8, Marinobacter aquaeolei strain VT8, Marinobacter hydrocarbonoclasticus VT8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.