STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
acyPPFAM: acylphosphatase; KEGG: mca:MCA0713 acylphosphatase. (92 aa)    
Predicted Functional Partners:
Maqu_1132
Phosphotransacetylase; Involved in acetate metabolism. In the N-terminal section; belongs to the CobB/CobQ family.
    
 0.917
Maqu_1231
KEGG: ssn:SSO_2538 EutII; TIGRFAM: phosphate acetyltransferase; PFAM: phosphate acetyl/butaryl transferase.
    
 0.915
ackA
Acetate kinase; Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction; Belongs to the acetokinase family.
     
 0.912
Maqu_0245
PFAM: Amidase; KEGG: dra:DR0235 6-aminohexanoate-cyclic-dimer hydrolase; Belongs to the amidase family.
    
  0.905
Maqu_2108
PFAM: Amidase; KEGG: abo:ABO_0120 amidase; Belongs to the amidase family.
    
  0.905
Maqu_0438
PFAM: aldehyde dehydrogenase; KEGG: abo:ABO_2709 aldehyde dehydrogenase (NAD); Belongs to the aldehyde dehydrogenase family.
    
 0.904
Maqu_0607
PFAM: aldehyde dehydrogenase; KEGG: abo:ABO_2709 aldehyde dehydrogenase (NAD); Belongs to the aldehyde dehydrogenase family.
    
 0.904
Maqu_3410
PFAM: aldehyde dehydrogenase; KEGG: hch:HCH_01852 NAD-dependent aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
    
 0.904
acsA
Acetyl-coenzyme A synthetase; Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA; Belongs to the ATP-dependent AMP-binding enzyme family.
     
 0.900
amiE
Amidase; Catalyzes the hydrolysis of short-chain aliphatic amides to their corresponding organic acids with release of ammonia.
    
  0.900
Your Current Organism:
Marinobacter hydrocarbonoclasticus
NCBI taxonomy Id: 351348
Other names: M. hydrocarbonoclasticus VT8, Marinobacter aquaeolei VT8, Marinobacter aquaeolei str. VT8, Marinobacter aquaeolei strain VT8, Marinobacter hydrocarbonoclasticus VT8
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