STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Acel_1450TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: sth:STH975 hypothetical protein. (622 aa)    
Predicted Functional Partners:
Acel_1452
PFAM: protein of unknown function DUF214; KEGG: dsy:DSY3655 hypothetical protein.
 
 
 0.988
Acel_1451
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sth:STH976 ABC transporter ATP-binding protein.
 
 0.977
Acel_1627
PFAM: protein of unknown function DUF214; KEGG: lxx:Lxx22040 putative ABC transporter permease protein.
 
 
 0.949
Acel_1626
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: afu:AF1469 ABC transporter, ATP-binding protein.
 
 0.869
Acel_1453
KEGG: fra:Francci3_0197 hypothetical protein.
       0.810
Acel_1179
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: nfa:nfa46550 putative ABC transporter ATP-binding protein.
 
 0.676
Acel_0165
Diguanylate cyclase with GAF sensor; TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; GAF domain protein; histidine kinase, HAMP region domain protein; KEGG: ade:Adeh_2704 diguanylate cyclase (GGDEF domain).
 
   
 0.469
Acel_1448
Periplasmic sensor signal transduction histidine kinase; PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase, HAMP region domain protein; histidine kinase A domain protein domain protein; KEGG: fra:Francci3_0235 periplasmic sensor signal transduction histidine kinase.
  
  
 0.420
Your Current Organism:
Acidothermus cellulolyticus
NCBI taxonomy Id: 351607
Other names: A. cellulolyticus 11B, Acidothermus cellulolyticus 11B, Acidothermus cellulolyticus str. 11B, Acidothermus cellulolyticus strain 11B
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