STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Acel_1835KEGG: fra:Francci3_3837 conserved hypothetical protein. (55 aa)    
Predicted Functional Partners:
Acel_2000
KEGG: sma:SAV4587 hypothetical protein.
  
     0.774
pepA-2
Leucyl aminopeptidase; Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N- terminal amino acids from various peptides.
       0.724
Acel_1836
PFAM: Enoyl-CoA hydratase/isomerase; KEGG: sco:SCO5144 putative acyl CoA isomerase; Belongs to the enoyl-CoA hydratase/isomerase family.
       0.605
Acel_1253
PFAM: Tetratricopeptide TPR_4; KEGG: tfu:Tfu_2042 hypothetical protein.
  
     0.587
Acel_1764
Periplasmic sensor signal transduction histidine kinase; PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase, HAMP region domain protein; histidine kinase A domain protein domain protein; KEGG: sco:SCO3012 putative two-component system histidine kinase.
  
     0.536
Acel_0382
KEGG: tfu:Tfu_2575 hypothetical protein.
  
     0.500
Acel_1981
KEGG: tfu:Tfu_0127 putative integral membrane protein.
  
     0.492
Acel_1767
KEGG: fra:Francci3_1839 hypothetical protein.
  
     0.482
Acel_1908
PFAM: Septum formation initiator; KEGG: sma:SAV3532 hypothetical protein.
  
     0.471
Acel_1408
KEGG: sco:SCO5855 DNA-binding protein.
  
    0.470
Your Current Organism:
Acidothermus cellulolyticus
NCBI taxonomy Id: 351607
Other names: A. cellulolyticus 11B, Acidothermus cellulolyticus 11B, Acidothermus cellulolyticus str. 11B, Acidothermus cellulolyticus strain 11B
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.