STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Acel_1849PFAM: short-chain dehydrogenase/reductase SDR; KEGG: sma:SAV6727 short chain dehydrogenase. (255 aa)    
Predicted Functional Partners:
Acel_1850
PFAM: aldehyde dehydrogenase; KEGG: mtc:MT2926 aldehyde dehydrogenase family protein; Belongs to the aldehyde dehydrogenase family.
   0.909
Acel_1851
PFAM: glutamine synthetase, catalytic region; KEGG: sma:SAV6725 putative glutamine synthetase.
     0.899
Acel_1852
Transcriptional regulator, GntR family; PFAM: regulatory protein GntR, HTH; GntR domain protein; Helix-turn-helix, type 11 domain protein; KEGG: sma:SAV6724 GntR-family transcriptional regulator.
 
  
 0.885
Acel_1848
Peptidase C26; PFAM: glutamine amidotransferase class-I; peptidase C26; KEGG: mbo:Mb2884c possible amidotransferase.
 
     0.801
Acel_1853
Amino acid/polyamine/organocation transporter, APC superfamily; PFAM: amino acid permease-associated region; KEGG: sma:SAV4122 amino acid permease; TC 2.A.3.
 
     0.798
Acel_0878
(acyl-carrier-protein) S-malonyltransferase-like protein; KEGG: fra:Francci3_3481 S-malonyltransferase.
 
 
 0.697
Acel_1439
PFAM: ferredoxin; oxidoreductase FAD/NAD(P)-binding domain protein; Oxidoreductase FAD-binding domain protein; KEGG: sco:SCO7475 putative phenylacetic acid degradation NADH oxidoreductase PaaE.
   
 
 0.565
Acel_1837
KEGG: fra:Francci3_0687 DNA-3-methyladenine glycosylase I; TIGRFAM: DNA-3-methyladenine glycosylase I; PFAM: methyladenine glycosylase.
 
      0.554
Acel_0055
KEGG: fra:Francci3_4326 hypothetical protein.
  
    0.544
Acel_0720
Transcriptional regulator, DeoR family; PFAM: regulatory protein, DeoR; Helix-turn-helix, type 11 domain protein; KEGG: sco:SCO3198 putative deoR-family transcriptional regulator.
  
    0.486
Your Current Organism:
Acidothermus cellulolyticus
NCBI taxonomy Id: 351607
Other names: A. cellulolyticus 11B, Acidothermus cellulolyticus 11B, Acidothermus cellulolyticus str. 11B, Acidothermus cellulolyticus strain 11B
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.