STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Csac_1078Cellulose 1,4-beta-cellobiosidase; PFAM: glycoside hydrolase, family 10; glycoside hydrolase, family 5; type 3a, cellulose-binding domain protein. (1039 aa)    
Predicted Functional Partners:
Csac_0678
Cellulase; PFAM: S-layer domain protein domain protein; glycoside hydrolase, family 5.
 
  
 0.960
Csac_1080
PFAM: glycoside hydrolase, family 5; Belongs to the glycosyl hydrolase 5 (cellulase A) family.
   
 0.944
Csac_0586
PFAM: glycoside hydrolase, family 3 domain protein.
 
  
 0.943
Csac_1076
PFAM: glycoside hydrolase, family 48; glycoside hydrolase, family 9; type 3a, cellulose-binding domain protein.
 
 
0.941
Csac_0137
PFAM: glycoside hydrolase, family 5; Belongs to the glycosyl hydrolase 5 (cellulase A) family.
  
  
 0.939
Csac_1091
Glycosyltransferase 36; PFAM: putative carbohydrate binding; glycosyltransferase 36; glycosyltransferase 36 associated.
 
  
 0.934
Csac_1089
Beta-glucosidase; PFAM: glycoside hydrolase, family 1.
    
 0.932
Csac_1102
PFAM: glycoside hydrolase, family 3 domain protein; Belongs to the glycosyl hydrolase 3 family.
    
 0.929
Csac_1730
Hypothetical protein.
   
 
 0.874
Csac_0663
Mannan endo-1,4-beta-mannosidase; PFAM: glycoside hydrolase, family 26; Belongs to the glycosyl hydrolase 26 family.
   
 0.828
Your Current Organism:
Caldicellulosiruptor saccharolyticus
NCBI taxonomy Id: 351627
Other names: C. saccharolyticus DSM 8903, Caldicellulosiruptor saccharolyticus DSM 8903, Caldicellulosiruptor saccharolyticus str. DSM 8903, Caldicellulosiruptor saccharolyticus strain DSM 8903
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