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rplM protein (Caldicellulosiruptor saccharolyticus) - STRING interaction network
"rplM" - 50S ribosomal protein L13 in Caldicellulosiruptor saccharolyticus
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query proteins and first shell of interactors
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second shell of interactors
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proteins of unknown 3D structure
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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rplM50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly (142 aa)    
Predicted Functional Partners:
rpsI
PFAM- ribosomal protein S9; Belongs to the universal ribosomal protein uS9 family (130 aa)
 
  0.999
rpmA
PFAM- ribosomal protein L27; Belongs to the bacterial ribosomal protein bL27 family (99 aa)
 
 
  0.999
rplQ
PFAM- ribosomal protein L17 (113 aa)
 
 
  0.999
rplC
50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3’-end of the 23S rRNA, where it nucleates assembly of the 50S subunit (210 aa)
 
 
  0.999
rplO
50S ribosomal protein L15; Binds to the 23S rRNA (147 aa)
 
 
  0.999
rplP
50S ribosomal protein L16; Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs (147 aa)
 
 
  0.999
rpsJ
30S ribosomal protein S10; Involved in the binding of tRNA to the ribosomes (106 aa)
   
 
  0.999
rpsG
30S ribosomal protein S7; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA (157 aa)
 
 
  0.999
rplN
50S ribosomal protein L14; Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome (122 aa)
 
 
  0.999
rpsP
PFAM- ribosomal protein S16; Belongs to the bacterial ribosomal protein bS16 family (81 aa)
 
 
  0.999
Your Current Organism:
Caldicellulosiruptor saccharolyticus
NCBI taxonomy Id: 351627
Other names: C. saccharolyticus DSM 8903, Caldicellulosiruptor saccharolyticus, Caldicellulosiruptor saccharolyticus DSM 8903, Caldicellulosiruptor saccharolyticus DSM8903, Caldicellulosiruptor saccharolyticus str. DSM 8903, Caldicellulosiruptor saccharolyticus strain DSM 8903
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