Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| EFB90222.1 | EFB90223.1 | HMPREF7215_2693 | HMPREF7215_2694 | Putative uridine phosphorylase; Identified by match to protein family HMM PF01048. | Hypothetical protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; identified by glimmer; putative. | 0.485 |
| EFB90223.1 | EFB90222.1 | HMPREF7215_2694 | HMPREF7215_2693 | Hypothetical protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; identified by glimmer; putative. | Putative uridine phosphorylase; Identified by match to protein family HMM PF01048. | 0.485 |
| EFB90223.1 | EFB90224.1 | HMPREF7215_2694 | HMPREF7215_2695 | Hypothetical protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; identified by glimmer; putative. | Hypothetical protein. | 0.459 |
| EFB90223.1 | EFB90225.1 | HMPREF7215_2694 | HMPREF7215_2696 | Hypothetical protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; identified by glimmer; putative. | Arsenite-activated ATPase (arsA); Identified by match to protein family HMM PF02374; match to protein family HMM TIGR00345. | 0.451 |
| EFB90224.1 | EFB90223.1 | HMPREF7215_2695 | HMPREF7215_2694 | Hypothetical protein. | Hypothetical protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; identified by glimmer; putative. | 0.459 |
| EFB90224.1 | EFB90225.1 | HMPREF7215_2695 | HMPREF7215_2696 | Hypothetical protein. | Arsenite-activated ATPase (arsA); Identified by match to protein family HMM PF02374; match to protein family HMM TIGR00345. | 0.781 |
| EFB90225.1 | EFB90223.1 | HMPREF7215_2696 | HMPREF7215_2694 | Arsenite-activated ATPase (arsA); Identified by match to protein family HMM PF02374; match to protein family HMM TIGR00345. | Hypothetical protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; identified by glimmer; putative. | 0.451 |
| EFB90225.1 | EFB90224.1 | HMPREF7215_2696 | HMPREF7215_2695 | Arsenite-activated ATPase (arsA); Identified by match to protein family HMM PF02374; match to protein family HMM TIGR00345. | Hypothetical protein. | 0.781 |