STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cgd7_160tRNA (guanine(46)-N(7))-methyltransferase. (251 aa)    
Predicted Functional Partners:
cgd1_2050
WD_REPEATS_REGION domain-containing protein.
   
 0.999
Cbf5p
H/ACA ribonucleoprotein complex subunit 4.
  
 
 0.912
cgd5_2470
tRNA (adenine(58)-N(1))-methyltransferase.
  
 
 0.887
cgd2_2420
Yd1036cp-like RluD, S4+type 1 pseudouridine synthase.
  
  
 0.866
cgd2_2710
TrmA RNA methylase; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family.
  
  
 0.865
cgd4_3250
tRNA (guanine(26)-N(2))-dimethyltransferase.
   
 
 0.864
cgd5_2390
GCD10p. RNA methylase.
   
  
 0.861
cgd3_890
Ybr061c-like, FtsJ methylase.
   
 
 0.855
cgd6_930
rRNA adenine N(6)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. rRNA adenine N(6)-methyltransferase family.
  
  
 0.855
cgd5_4420
MJ0710-like (Thump + methylase domains). RNA methylase.
   
 
 0.820
Your Current Organism:
Cryptosporidium parvum
NCBI taxonomy Id: 353152
Other names: C. parvum Iowa II, Cryptosporidium parvum Iowa II, Cryptosporidium parvum strain Iowa type II
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