Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Cbf5p | cgd1_2050 | Q5CU83 | Q5CSM6 | H/ACA ribonucleoprotein complex subunit 4. | WD_REPEATS_REGION domain-containing protein. | 0.778 |
Cbf5p | cgd2_2420 | Q5CU83 | Q5CTM4 | H/ACA ribonucleoprotein complex subunit 4. | Yd1036cp-like RluD, S4+type 1 pseudouridine synthase. | 0.836 |
Cbf5p | cgd2_2710 | Q5CU83 | Q5CTJ7 | H/ACA ribonucleoprotein complex subunit 4. | TrmA RNA methylase; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family. | 0.763 |
Cbf5p | cgd3_890 | Q5CU83 | Q5CUZ4 | H/ACA ribonucleoprotein complex subunit 4. | Ybr061c-like, FtsJ methylase. | 0.707 |
Cbf5p | cgd4_3250 | Q5CU83 | Q5CQU6 | H/ACA ribonucleoprotein complex subunit 4. | tRNA (guanine(26)-N(2))-dimethyltransferase. | 0.848 |
Cbf5p | cgd5_2390 | Q5CU83 | Q5CRL0 | H/ACA ribonucleoprotein complex subunit 4. | GCD10p. RNA methylase. | 0.672 |
Cbf5p | cgd5_2470 | Q5CU83 | Q5CRK2 | H/ACA ribonucleoprotein complex subunit 4. | tRNA (adenine(58)-N(1))-methyltransferase. | 0.781 |
Cbf5p | cgd5_4420 | Q5CU83 | Q5CQ23 | H/ACA ribonucleoprotein complex subunit 4. | MJ0710-like (Thump + methylase domains). RNA methylase. | 0.402 |
Cbf5p | cgd6_930 | Q5CU83 | Q5CXI8 | H/ACA ribonucleoprotein complex subunit 4. | rRNA adenine N(6)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. rRNA adenine N(6)-methyltransferase family. | 0.834 |
Cbf5p | cgd7_160 | Q5CU83 | A3FPL7 | H/ACA ribonucleoprotein complex subunit 4. | tRNA (guanine(46)-N(7))-methyltransferase. | 0.912 |
cgd1_2050 | Cbf5p | Q5CSM6 | Q5CU83 | WD_REPEATS_REGION domain-containing protein. | H/ACA ribonucleoprotein complex subunit 4. | 0.778 |
cgd1_2050 | cgd2_2420 | Q5CSM6 | Q5CTM4 | WD_REPEATS_REGION domain-containing protein. | Yd1036cp-like RluD, S4+type 1 pseudouridine synthase. | 0.644 |
cgd1_2050 | cgd2_2710 | Q5CSM6 | Q5CTJ7 | WD_REPEATS_REGION domain-containing protein. | TrmA RNA methylase; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family. | 0.554 |
cgd1_2050 | cgd3_890 | Q5CSM6 | Q5CUZ4 | WD_REPEATS_REGION domain-containing protein. | Ybr061c-like, FtsJ methylase. | 0.850 |
cgd1_2050 | cgd4_3250 | Q5CSM6 | Q5CQU6 | WD_REPEATS_REGION domain-containing protein. | tRNA (guanine(26)-N(2))-dimethyltransferase. | 0.725 |
cgd1_2050 | cgd5_2390 | Q5CSM6 | Q5CRL0 | WD_REPEATS_REGION domain-containing protein. | GCD10p. RNA methylase. | 0.816 |
cgd1_2050 | cgd5_2470 | Q5CSM6 | Q5CRK2 | WD_REPEATS_REGION domain-containing protein. | tRNA (adenine(58)-N(1))-methyltransferase. | 0.878 |
cgd1_2050 | cgd5_4420 | Q5CSM6 | Q5CQ23 | WD_REPEATS_REGION domain-containing protein. | MJ0710-like (Thump + methylase domains). RNA methylase. | 0.851 |
cgd1_2050 | cgd6_930 | Q5CSM6 | Q5CXI8 | WD_REPEATS_REGION domain-containing protein. | rRNA adenine N(6)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. rRNA adenine N(6)-methyltransferase family. | 0.481 |
cgd1_2050 | cgd7_160 | Q5CSM6 | A3FPL7 | WD_REPEATS_REGION domain-containing protein. | tRNA (guanine(46)-N(7))-methyltransferase. | 0.999 |
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