Q4D8X0_TRYCC protein (Trypanosoma cruzi) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

Q4D8X0_TRYCC

Target SNARE, putative. (316 aa)

Predicted Functional Partners:

Q4DAJ3_TRYCC

0.989

Q4DGR9_TRYCC

0.989

Q4DP28_TRYCC

0.903

Q4DS88_TRYCC

0.903

Q4CSP4_TRYCC

0.900

Q4CYJ1_TRYCC

0.900

Q4D6S7_TRYCC

0.900

Q4DBX0_TRYCC

0.900

Q4DFY1_TRYCC

0.900

Q4CNX7_TRYCC

0.871

Your Current Organism:

Trypanosoma cruzi

NCBI taxonomy Id: 353153
Other names: T. cruzi strain CL Brener, Trypanosoma cruzi strain CL Brener

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
Q4CNX7_TRYCC	Q4CYJ1_TRYCC	Q4CNX7	Q4CYJ1	SNARE protein, putative.	Target SNARE, putative.	0.871
Q4CNX7_TRYCC	Q4D8X0_TRYCC	Q4CNX7	Q4D8X0	SNARE protein, putative.	Target SNARE, putative.	0.871
Q4CNX7_TRYCC	Q4DP28_TRYCC	Q4CNX7	Q4DP28	SNARE protein, putative.	Vesicle-associated membrane protein, putative; Belongs to the synaptobrevin family.	0.998
Q4CNX7_TRYCC	Q4DS88_TRYCC	Q4CNX7	Q4DS88	SNARE protein, putative.	Vesicle-associated membrane protein, putative; Belongs to the synaptobrevin family.	0.998
Q4CSP4_TRYCC	Q4CYJ1_TRYCC	Q4CSP4	Q4CYJ1	Uncharacterized protein.	Target SNARE, putative.	0.900
Q4CSP4_TRYCC	Q4D6S7_TRYCC	Q4CSP4	Q4D6S7	Uncharacterized protein.	t-SNARE coiled-coil homology domain-containing protein.	0.900
Q4CSP4_TRYCC	Q4D8X0_TRYCC	Q4CSP4	Q4D8X0	Uncharacterized protein.	Target SNARE, putative.	0.900
Q4CSP4_TRYCC	Q4DBX0_TRYCC	Q4CSP4	Q4DBX0	Uncharacterized protein.	t-SNARE coiled-coil homology domain-containing protein.	0.900
Q4CSP4_TRYCC	Q4DFY1_TRYCC	Q4CSP4	Q4DFY1	Uncharacterized protein.	Uncharacterized protein.	0.900
Q4CYJ1_TRYCC	Q4CNX7_TRYCC	Q4CYJ1	Q4CNX7	Target SNARE, putative.	SNARE protein, putative.	0.871
Q4CYJ1_TRYCC	Q4CSP4_TRYCC	Q4CYJ1	Q4CSP4	Target SNARE, putative.	Uncharacterized protein.	0.900
Q4CYJ1_TRYCC	Q4D6S7_TRYCC	Q4CYJ1	Q4D6S7	Target SNARE, putative.	t-SNARE coiled-coil homology domain-containing protein.	0.900
Q4CYJ1_TRYCC	Q4D8X0_TRYCC	Q4CYJ1	Q4D8X0	Target SNARE, putative.	Target SNARE, putative.	0.900
Q4CYJ1_TRYCC	Q4DAJ3_TRYCC	Q4CYJ1	Q4DAJ3	Target SNARE, putative.	Syntaxin binding protein, putative; Belongs to the STXBP/unc-18/SEC1 family.	0.989
Q4CYJ1_TRYCC	Q4DBX0_TRYCC	Q4CYJ1	Q4DBX0	Target SNARE, putative.	t-SNARE coiled-coil homology domain-containing protein.	0.900
Q4CYJ1_TRYCC	Q4DFY1_TRYCC	Q4CYJ1	Q4DFY1	Target SNARE, putative.	Uncharacterized protein.	0.900
Q4CYJ1_TRYCC	Q4DGR9_TRYCC	Q4CYJ1	Q4DGR9	Target SNARE, putative.	Syntaxin binding protein 1, putative; Belongs to the STXBP/unc-18/SEC1 family.	0.989
Q4CYJ1_TRYCC	Q4DP28_TRYCC	Q4CYJ1	Q4DP28	Target SNARE, putative.	Vesicle-associated membrane protein, putative; Belongs to the synaptobrevin family.	0.903
Q4CYJ1_TRYCC	Q4DS88_TRYCC	Q4CYJ1	Q4DS88	Target SNARE, putative.	Vesicle-associated membrane protein, putative; Belongs to the synaptobrevin family.	0.903
Q4D6S7_TRYCC	Q4CSP4_TRYCC	Q4D6S7	Q4CSP4	t-SNARE coiled-coil homology domain-containing protein.	Uncharacterized protein.	0.900