STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIP96436.1Alkylated DNA repair dioxygenase AlkB. (202 aa)    
Predicted Functional Partners:
SIP96477.1
Pathogenicity locus.
       0.773
SIP96513.1
Hypothetical protein.
       0.693
SIP96544.1
Protein ImuA.
     
 0.513
SIP96576.1
Protein ImuB.
       0.498
SIP96604.1
Error-prone DNA polymerase; Belongs to the DNA polymerase type-C family. DnaE2 subfamily.
       0.483
SIQ10983.1
Ketopantoate reductase; Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid.
   
    0.461
SIR69850.1
2-dehydropantoate 2-reductase; Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid.
   
    0.461
SIS10051.1
Peptidase M60, enhancin and enhancin-like.
  
   
 0.439
SIP96401.1
FecR family protein.
       0.408
Your Current Organism:
Mucilaginibacter lappiensis
NCBI taxonomy Id: 354630
Other names: LMG 25358, LMG:25358, M. lappiensis, Mucilaginibacter lappiensis Mannisto et al. 2010, Mucilaginibacter sp. ANJLI2, Mucilaginibacter sp. MP601, Mucilaginibacter sp. RA1BR4, Sphingobacteriaceae bacterium ANJLI2, strain ANJLI2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.