STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIR17302.1Transcriptional regulator, LacI family. (345 aa)    
Predicted Functional Partners:
SIS04246.1
Glutamate synthase (NADH) large subunit.
    
 
 0.931
SIS12742.1
Amino acid adenylation domain-containing protein.
    
 
 0.850
SIS13201.1
HxxPF-repeated domain-containing protein.
    
 
 0.850
SIR42605.1
Phosphocarrier protein.
   
 
 0.712
SIR17234.1
Protein of unknown function.
       0.565
SIR17266.1
Hypothetical protein.
       0.565
SIR17336.1
Phosphotransferase enzyme family protein.
       0.530
SIS12762.1
Non-ribosomal peptide synthase domain TIGR01720/amino acid adenylation domain-containing protein/natural product biosynthesis luciferase-like monooxygenase domain-containing protein.
    
   0.525
SIS05048.1
Surfactin family lipopeptide synthetase A; Belongs to the ATP-dependent AMP-binding enzyme family.
    
 
 0.518
ribBA
3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the C-terminal section; belongs to the GTP cyclohydrolase II family.
    
   0.515
Your Current Organism:
Mucilaginibacter lappiensis
NCBI taxonomy Id: 354630
Other names: LMG 25358, LMG:25358, M. lappiensis, Mucilaginibacter lappiensis Mannisto et al. 2010, Mucilaginibacter sp. ANJLI2, Mucilaginibacter sp. MP601, Mucilaginibacter sp. RA1BR4, Sphingobacteriaceae bacterium ANJLI2, strain ANJLI2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.