STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIR53869.1L-fuconate dehydratase; Belongs to the mandelate racemase/muconate lactonizing enzyme family. (411 aa)    
Predicted Functional Partners:
SIR18221.1
L-fuconolactonase.
 
  
 0.953
SIR53850.1
NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family.
 
  
  0.947
SIR53912.1
L-rhamnose mutarotase.
 
   
 0.866
SIR18279.1
NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family.
  
  
  0.745
SIR53890.1
solute:Na+ symporter, SSS family; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.
 
     0.648
SIS05048.1
Surfactin family lipopeptide synthetase A; Belongs to the ATP-dependent AMP-binding enzyme family.
  
 
 0.546
SIQ04496.1
Regulator of RNase E activity RraA.
 
 
 0.514
SIR53997.1
alpha-L-fucosidase.
 
     0.482
SIR32992.1
Protocatechuate 3,4-dioxygenase beta subunit.
  
 
 0.460
SIP90272.1
4-hydroxyproline epimerase; Belongs to the proline racemase family.
  
  
 0.452
Your Current Organism:
Mucilaginibacter lappiensis
NCBI taxonomy Id: 354630
Other names: LMG 25358, LMG:25358, M. lappiensis, Mucilaginibacter lappiensis Mannisto et al. 2010, Mucilaginibacter sp. ANJLI2, Mucilaginibacter sp. MP601, Mucilaginibacter sp. RA1BR4, Sphingobacteriaceae bacterium ANJLI2, strain ANJLI2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.