STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APZ42_021848Sphingomyelin phosphodiesterase 3. (467 aa)    
Predicted Functional Partners:
APZ42_016108
Neutral sphingomyelinase.
     
 0.880
APZ42_015797
Sphingomyelin phosphodiesterase 4.
     
 0.867
APZ42_020555
Phosphatidylcholine:ceramide cholinephosphotransferase.
     
 0.858
APZ42_031076
Sphingomyelin phosphodiesterase.
     
 0.858
APZ42_032186
Neutral ceramidase.
     
 0.745
APZ42_032179
Neutral ceramidase.
     
 0.745
APZ42_025828
Sphingomyelin synthase-related protein 1.
     
 0.715
APZ42_027256
Sphingomyelin phosphodiesterase; Converts sphingomyelin to ceramide.
     
 0.640
APZ42_029601
Sphingomyelin phosphodiesterase; Converts sphingomyelin to ceramide.
     
 0.640
APZ42_014680
Sphingomyelin phosphodiesterase; Converts sphingomyelin to ceramide.
     
 0.640
Your Current Organism:
Daphnia magna
NCBI taxonomy Id: 35525
Other names: D. magna
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