STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APZ42_023874Putative Arginine--tRNA ligase, mitochondrial; Belongs to the class-I aminoacyl-tRNA synthetase family. (592 aa)    
Predicted Functional Partners:
APZ42_010917
Bifunctional glutamate/proline--tRNA ligase.
  
 0.999
APZ42_015681
Putative Methionyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 0.988
APZ42_019806
Tyrosine--tRNA ligase.
  
 0.974
APZ42_030838
Isoleucyl-tRNA synthetase, cytoplasmic protein; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 0.932
APZ42_027606
Isoleucine--tRNA ligase, mitochondrial.
  
 0.932
APZ42_018431
Putative Proline--tRNA ligase, mitochondrial.
  
 0.929
APZ42_028062
Lysine--tRNA ligase.
  
 0.920
APZ42_004129
Putative Isoleucyl-tRNA synthetase.
  
 0.919
APZ42_001800
Putative Prolyl-trna synthetase.
  
 0.911
APZ42_020463
Putative Glutamate--tRNA ligase, mitochondrial; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 0.909
Your Current Organism:
Daphnia magna
NCBI taxonomy Id: 35525
Other names: D. magna
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