STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APZ42_027432Putative Transcription factor GATA-5. (623 aa)    
Predicted Functional Partners:
APZ42_025330
Putative Fork head transcription factor.
  
 
 0.863
APZ42_018322
Serum response factor-like protein.
    
 0.825
APZ42_011208
Forkhead box Q1-like protein.
  
 
 0.757
APZ42_029254
Transcription factor SOX-8-like protein.
    
 0.734
APZ42_026444
MAM domain-containing glycosylphosphatidylinositol anchor protein 1.
    
 0.699
APZ42_026439
Uncharacterized protein.
    
 0.699
APZ42_020740
Histone acetyltransferase KAT2A.
    
 0.696
APZ42_016764
Uncharacterized protein.
   
 0.687
APZ42_016781
Putative Helix-loop-helix protein 1.
   
 0.687
APZ42_030636
Putative Dorsocross2.
    
 0.681
Your Current Organism:
Daphnia magna
NCBI taxonomy Id: 35525
Other names: D. magna
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.