STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APZ42_019015U3 small nucleolar RNA-associated protein 18. (598 aa)    
Predicted Functional Partners:
EOG090X05X9
U3 small nucleolar RNA-associated protein 15.
  
 0.999
EOG090X058P
Cell adhesion complex protein bystin.
   
 
 0.999
APZ42_012184
Nucleolar protein 14.
   
 0.999
EOG090X0IJO
Neuroguidin-A.
   
 
 0.999
APZ42_032181
WD repeat-containing protein 46.
   
 0.999
APZ42_024016
U3 small nucleolar RNA-associated protein 4.
   
 0.999
APZ42_030956
Nucleolar protein 6.
   
 0.999
APZ42_026499
WD repeat-containing protein 3 variant.
   
 0.999
APZ42_012038
U3 small nucleolar RNA-interacting protein.
  
 0.999
APZ42_032634
WD repeat-containing protein 43.
   
 0.999
Your Current Organism:
Daphnia magna
NCBI taxonomy Id: 35525
Other names: D. magna
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.