STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APZ42_01752228S ribosomal protein S31. (361 aa)    
Predicted Functional Partners:
APZ42_034175
28S ribosomal protein S33, mitochondrial.
   
 0.982
APZ42_019236
28S ribosomal protein S22, mitochondrial.
   
 0.980
APZ42_012930
28S ribosomal protein S10, mitochondrial.
    
  0.980
APZ42_018673
28S ribosomal protein S18b, mitochondrial.
   
 0.979
APZ42_023952
Protein PTCD3, mitochondrial.
    
 0.975
APZ42_000752
28S ribosomal protein S9.
   
 0.974
EOG090X0FQ5
28S ribosomal protein S25, mitochondrial.
   
 0.973
APZ42_028260
28S ribosomal protein S23, mitochondrial.
   
 0.973
EOG090X0I6M
28S ribosomal protein S24, mitochondrial.
    
 0.973
APZ42_033773
28S ribosomal protein S35, mitochondrial.
   
  0.973
Your Current Organism:
Daphnia magna
NCBI taxonomy Id: 35525
Other names: D. magna
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.