STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APZ42_005220Copia protein (Gag-int-pol protein). (246 aa)    
Predicted Functional Partners:
APZ42_015714
Uncharacterized protein.
  
     0.501
APZ42_001818
Putative Importin subunit alpha-2/sw.
  
     0.458
APZ42_015731
Uncharacterized protein.
  
     0.446
APZ42_008569
Copia protein (Gag-int-pol protein).
  
     0.445
APZ42_001368
Putative Copia protein (Gag-int-pol protein).
  
     0.445
APZ42_021944
Uncharacterized protein.
  
     0.444
APZ42_010025
Reverse transcriptase Ty1/copia-type domain-containing protein.
  
     0.441
APZ42_010178
Reverse transcriptase Ty1/copia-type domain-containing protein.
  
     0.439
APZ42_009842
Uncharacterized protein.
  
     0.437
APZ42_008570
Copia protein (Gag-int-pol protein).
  
     0.437
Your Current Organism:
Daphnia magna
NCBI taxonomy Id: 35525
Other names: D. magna
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.