STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APZ42_013553Eukaryotic peptide chain release factor subunit 1. (438 aa)    
Predicted Functional Partners:
APZ42_021169
Eukaryotic peptide chain release factor GTP-binding subunit ERF3A.
   
 0.999
APZ42_020212
ATP-binding cassette sub-family E member 1.
   
 
 0.998
APZ42_027865
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
    
 0.996
APZ42_015879
Elongation factor 1-alpha; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis.
   
 0.973
ef1a1
Elongation factor 1-alpha; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis.
   
 0.973
APZ42_018033
Serine/threonine-protein kinase SMG1; Belongs to the PI3/PI4-kinase family.
    
 
 0.949
APZ42_013106
Putative Serine/threonine-protein kinase SMG1.
    
 
 0.949
APZ42_024246
40S ribosomal protein SA; Required for the assembly and/or stability of the 40S ribosomal subunit. Required for the processing of the 20S rRNA- precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits.
   
 0.945
APZ42_004897
40S ribosomal protein S2; Belongs to the universal ribosomal protein uS5 family.
   
 0.930
APZ42_005620
Ubiquitin-40S ribosomal protein S27a.
   
  0.926
Your Current Organism:
Daphnia magna
NCBI taxonomy Id: 35525
Other names: D. magna
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