STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APZ42_006005ABC protein, subfamily ABCG. (336 aa)    
Predicted Functional Partners:
APZ42_006887
ABC protein, subfamily ABCG.
 
     0.892
APZ42_004433
ABC protein, subfamily ABCG.
 
     0.856
APZ42_001270
ABC protein, subfamily ABCG.
 
     0.841
APZ42_034449
ATP-binding cassette sub-family G member 5.
   
 0.760
APZ42_026033
Immunoglobulin-binding protein 1.
    
  0.577
APZ42_017137
TIP41-like protein.
     
 0.517
APZ42_014245
FAD synthase.
     
 0.486
APZ42_023418
Putative FAD synthase.
     
 0.486
EOG090X0BEK
ATP synthase subunit gamma.
   
   0.469
APZ42_002193
Cytochrome C oxidase assembly protein COX15.
    
 0.468
Your Current Organism:
Daphnia magna
NCBI taxonomy Id: 35525
Other names: D. magna
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.