STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APZ42_029342VASt domain-containing protein. (902 aa)    
Predicted Functional Partners:
APZ42_019814
Two pore calcium channel protein 1.
    
  0.768
APZ42_016628
Sodium leak channel non-selective protein.
    
  0.768
APZ42_015146
Putative Zinc finger MYND domain-containing protein 10/sw.
    
  0.768
APZ42_033260
Tetratricopeptide repeat protein 21A.
    
  0.768
APZ42_032451
Sodium channel protein; Mediates the voltage-dependent sodium ion permeability of excitable membranes. Assuming opened or closed conformations in response to the voltage difference across the membrane, the protein forms a sodium-selective channel through which Na(+) ions may pass in accordance with their electrochemical gradient.
    
  0.768
APZ42_029181
Sodium channel protein.
    
  0.768
APZ42_027938
Voltage-dependent calcium channel type A subunit alpha-1.
    
  0.768
APZ42_027112
Voltage-dependent calcium channel type D subunit alpha-1.
    
  0.768
APZ42_027110
Voltage-dependent calcium channel type D subunit alpha-1.
    
  0.768
APZ42_026663
Voltage-dependent L-type calcium channel subunit alpha; Voltage-sensitive calcium channels (VSCC) mediate the entry of calcium ions into excitable cells and are also involved in a variety of calcium-dependent processes, including muscle contraction, hormone or neurotransmitter release, gene expression, cell motility, cell division and cell death; Belongs to the calcium channel alpha-1 subunit (TC 1.A.1.11) family.
    
  0.768
Your Current Organism:
Daphnia magna
NCBI taxonomy Id: 35525
Other names: D. magna
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