STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APZ42_023864Nipped-B protein. (2128 aa)    
Predicted Functional Partners:
APZ42_010950
Double-strand-break repair protein rad21.
   
 0.998
APZ42_011467
MAU2 chromatid cohesion factor.
    
 0.998
APZ42_021684
Structural maintenance of chromosomes protein.
   
 0.998
APZ42_029033
Stromal antigen, copy A-like protein.
   
 0.995
APZ42_027250
Structural maintenance of chromosomes protein.
   
 0.986
APZ42_026726
Structural maintenance of chromosomes protein 3.
   
 0.986
APZ42_018091
Pds5.
   
 0.977
APZ42_015351
Double-strand-break repair protein rad21.
   
 0.960
APZ42_024909
PHD finger protein.
   
  
 0.941
APZ42_029766
Wings apart protein.
   
 0.909
Your Current Organism:
Daphnia magna
NCBI taxonomy Id: 35525
Other names: D. magna
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.