STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APZ42_023721Putative Slowpoke-binding protein. (331 aa)    
Predicted Functional Partners:
EOG090X0GN3
Sorting nexin-12.
     
 0.595
APZ42_016501
Synaptobrevin YKT6; Belongs to the synaptobrevin family.
     
 0.572
APZ42_014065
Syntaxin-6; Belongs to the syntaxin family.
    
 0.531
APZ42_027306
Syntaxin-8.
    
 0.531
APZ42_019868
Syntaxin-12; Belongs to the syntaxin family.
     
 0.517
APZ42_013694
t-SNARE domain-containing protein; Belongs to the syntaxin family.
     
 0.517
APZ42_011596
Syntaxin-17.
     
 0.517
APZ42_017485
RAD50-interacting protein.
   
 
  0.512
APZ42_025436
Non-specific serine/threonine protein kinase.
    
  0.493
APZ42_023626
Ribosomal protein S6 kinase; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. S6 kinase subfamily.
    
  0.493
Your Current Organism:
Daphnia magna
NCBI taxonomy Id: 35525
Other names: D. magna
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