STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APZ42_021580Putative FUN14 domain-containing protein 1. (120 aa)    
Predicted Functional Partners:
APZ42_030931
Microtubule-associated proteins 1A/1B light chain 3A.
    
 0.994
APZ42_030266
Serine/threonine-protein phosphatase PGAM5, mitochondrial.
     
 0.988
APZ42_019849
Casein kinase II subunit alpha; Belongs to the protein kinase superfamily.
     
 0.935
APZ42_029279
Autophagy-related 8a.
    
 0.923
APZ42_026848
Serine/threonine-protein kinase ULK2.
    
 0.886
APZ42_033673
Autophagy-related 8a.
    
 0.833
APZ42_023748
Tyrosine-protein kinase.
    
  0.773
APZ42_016095
Tyrosine-protein kinase.
    
  0.773
APZ42_008992
Protein kinase domain-containing protein.
    
 0.725
APZ42_033416
Serine/threonine-protein kinase ULK3; Belongs to the protein kinase superfamily.
    
 0.725
Your Current Organism:
Daphnia magna
NCBI taxonomy Id: 35525
Other names: D. magna
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