STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APZ42_02043540S ribosomal protein S6; Belongs to the eukaryotic ribosomal protein eS6 family. (245 aa)    
Predicted Functional Partners:
APZ42_030109
60S ribosomal protein L27a; Belongs to the universal ribosomal protein uL15 family.
   
 
 0.999
APZ42_024534
60S ribosomal protein L21.
   
 
 0.999
EOG090X0IZN
60S ribosomal protein L35a.
   
 
 0.999
EOG090X09YS
60S ribosomal protein L5.
   
 
 0.999
APZ42_024246
40S ribosomal protein SA; Required for the assembly and/or stability of the 40S ribosomal subunit. Required for the processing of the 20S rRNA- precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits.
  
 0.999
APZ42_004897
40S ribosomal protein S2; Belongs to the universal ribosomal protein uS5 family.
   
 0.999
EOG090X058P
Cell adhesion complex protein bystin.
    
 0.999
APZ42_010974
Ribosomal protein L19; Belongs to the eukaryotic ribosomal protein eL19 family.
   
 
 0.999
APZ42_017594
60S ribosomal protein L13a; Belongs to the universal ribosomal protein uL13 family.
  
 0.999
APZ42_029106
60S ribosomal protein L34.
   
 
 0.999
Your Current Organism:
Daphnia magna
NCBI taxonomy Id: 35525
Other names: D. magna
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