STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APZ42_017348Putative Alpha--fucosyltransferase C. (406 aa)    
Predicted Functional Partners:
APZ42_017965
Beta-hexosaminidase.
    
 0.528
APZ42_014844
Beta-hexosaminidase.
    
 0.528
APZ42_013386
Beta-hexosaminidase.
    
 0.528
APZ42_016655
Beta-hexosaminidase.
    
 0.528
EOG090X03KK
Alpha-(1,6)-fucosyltransferase; Catalyzes the addition of fucose in alpha 1-6 linkage to the first GlcNAc residue, next to the peptide chains in N-glycans. Belongs to the glycosyltransferase 23 family.
     
 0.526
APZ42_012004
L-Fucosyltransferase; Belongs to the glycosyltransferase 11 family.
     
 0.524
APZ42_016666
Xylosyltransferase oxt.
     
 0.522
APZ42_011647
EGF domain-specific O-linked N-acetylglucosamine transferase.
     
 0.516
APZ42_034089
Beta-1,4-galactosyltransferase 6.
     
 0.507
APZ42_022802
Putative Beta-1,4-N-acetylgalactosaminyltransferase BRE-4.
     
 0.507
Your Current Organism:
Daphnia magna
NCBI taxonomy Id: 35525
Other names: D. magna
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