STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SOVF_177640Alba domain-containing protein. (263 aa)    
Predicted Functional Partners:
SOVF_130070
Ribonuclease P protein subunit p29; Component of ribonuclease P, a ribonucleoprotein complex that generates mature tRNA molecules by cleaving their 5'-ends.
    
 0.802
SOVF_040940
Uncharacterized protein.
    
 0.740
SOVF_008510
Uncharacterized protein.
    
 0.740
SOVF_027510
Uncharacterized protein.
    
 0.719
SOVF_194610
Ribosomal_L7Ae domain-containing protein.
   
 0.652
SOVF_115400
Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family.
   
 0.652
SOVF_105660
S4 RNA-binding domain-containing protein; Belongs to the universal ribosomal protein uS4 family.
   
 
  0.485
SOVF_093880
S4 RNA-binding domain-containing protein; Belongs to the universal ribosomal protein uS4 family.
   
 
  0.485
rps4
30S ribosomal protein S4, chloroplastic; Component of the chloroplast ribosome (chloro-ribosome), a dedicated translation machinery responsible for the synthesis of chloroplast genome-encoded proteins, including proteins of the transcription and translation machinery and components of the photosynthetic apparatus.
   
 
  0.485
SOVF_127330
S4 RNA-binding domain-containing protein.
   
 
  0.448
Your Current Organism:
Spinacia oleracea
NCBI taxonomy Id: 3562
Other names: S. oleracea, Spinacea oleracea, Spinacia oleracea L., spinach
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