STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SOVF_173680Uncharacterized protein. (630 aa)    
Predicted Functional Partners:
SOVF_025760
Trehalase.
  
 0.984
SOVF_181250
Glyco_transf_20 domain-containing protein.
 
  
 0.817
SOVF_076000
Glyco_transf_20 domain-containing protein.
 
  
 0.817
SOVF_187820
Glyco_transf_20 domain-containing protein.
  
  
  0.815
SOVF_092470
Glyco_transf_20 domain-containing protein.
  
  
  0.815
SOVF_072340
Glyco_transf_20 domain-containing protein.
  
  
  0.815
SOVF_055250
Glyco_transf_20 domain-containing protein.
  
  
  0.815
SOVF_177210
Glyco_transf_20 domain-containing protein.
  
  
  0.814
SOVF_203760
Uncharacterized protein.
   
  
 0.562
SOVF_150340
Pribosyltran domain-containing protein.
   
  
 0.562
Your Current Organism:
Spinacia oleracea
NCBI taxonomy Id: 3562
Other names: S. oleracea, Spinacea oleracea, Spinacia oleracea L., spinach
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.