STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SOVF_060740Uncharacterized protein. (353 aa)    
Predicted Functional Partners:
SOVF_150050
Uncharacterized protein.
   
   0.540
SOVF_048540
Uncharacterized protein.
   
   0.503
SOVF_037280
S5 DRBM domain-containing protein; Belongs to the universal ribosomal protein uS5 family.
   
   0.500
SOVF_185930
Uncharacterized protein.
   
   0.491
SOVF_143640
Uncharacterized protein.
   
   0.490
SOVF_129510
Uncharacterized protein; Belongs to the bacterial ribosomal protein bS18 family.
   
   0.489
SOVF_209370
Ribosomal_L18e/L15P domain-containing protein.
   
   0.487
SOVF_011760
Uncharacterized protein; Belongs to the universal ribosomal protein uL3 family.
   
   0.483
SOVF_155540
Uncharacterized protein.
   
   0.482
SOVF_039650
Uncharacterized protein; Belongs to the enoyl-CoA hydratase/isomerase family.
   
   0.481
Your Current Organism:
Spinacia oleracea
NCBI taxonomy Id: 3562
Other names: S. oleracea, Spinacea oleracea, Spinacia oleracea L., spinach
Server load: low (26%) [HD]