STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SOVF_066090Uncharacterized protein. (478 aa)    
Predicted Functional Partners:
SOVF_161060
Metallophos domain-containing protein.
    
 0.775
SOVF_094590
Serine/threonine-protein phosphatase.
    
 0.775
SOVF_016820
Serine/threonine-protein phosphatase.
    
 0.775
SOVF_130650
Uncharacterized protein.
    
 0.660
SOVF_128280
Uncharacterized protein.
    
 0.660
SOVF_081220
Uncharacterized protein.
    
 0.660
SOVF_054240
Uncharacterized protein.
    
 0.660
SOVF_139410
Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B; Belongs to the phosphatase 2A regulatory subunit B family.
     
 0.656
SOVF_045840
Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B; Belongs to the phosphatase 2A regulatory subunit B family.
     
 0.656
SOVF_079140
C-CAP/cofactor C-like domain-containing protein.
  
 
   0.570
Your Current Organism:
Spinacia oleracea
NCBI taxonomy Id: 3562
Other names: S. oleracea, Spinacea oleracea, Spinacia oleracea L., spinach
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.