STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SOVF_007440AAA domain-containing protein. (994 aa)    
Predicted Functional Partners:
SOVF_108200
Prohibitin.
   
 0.739
SOVF_191360
AAA domain-containing protein.
  
  
0.674
SOVF_114020
Prohibitin.
   
 0.643
SOVF_030070
AAA domain-containing protein.
  
  
0.613
SOVF_140020
Uncharacterized protein.
      
 0.600
SOVF_018970
Uncharacterized protein.
  
  
 0.590
SOVF_075510
Phytochrome; Regulatory photoreceptor which exists in two forms that are reversibly interconvertible by light: the Pr form that absorbs maximally in the red region of the spectrum and the Pfr form that absorbs maximally in the far-red region.
    
 
 0.583
SOVF_191930
Hypoxanthine phosphoribosyltransferase; Belongs to the purine/pyrimidine phosphoribosyltransferase family.
  
  
 0.535
SOVF_067900
GYF_2 domain-containing protein.
   
  
 0.515
SOVF_083660
Uncharacterized protein.
  
   
 0.504
Your Current Organism:
Spinacia oleracea
NCBI taxonomy Id: 3562
Other names: S. oleracea, Spinacea oleracea, Spinacia oleracea L., spinach
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